Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816450.1_cds_XP_016498808.1_12794
CDS Infomation

[gene=LOC107817483] [db_xref=GeneID:107817483] [protein=DNA polymerase beta-like isoform X4] [protein_id=XP_016498808.1] [location=join(15340..15456,15565..15702,17068..17400,17522..17615,17727..17857,18102..18164,18348..18527,18606..18659,19138..19226,20112..20202,21051..21131,21786..21803)] [gbkey=CDS]
Sequence

ATGGCGCCAAAATCTACGTCGAAGAAGGATAAATCTCCACCGTCAGATCCAGATGGAATG
TTTTCGGGTATGGTTGTGTTCTTGATCGAAACCGGAGTCCAATCCAGGCGGTTACAGATA
TGGAAGCAGAAATTGGTGCAAATGGGGGCTAAAATAGAGGAACGTTTTTCCAAAAATGTT
ACTCATGTTTTTGCAATTGATGCGAATTCGCTTCTTCAGAAAGTTGATCGAGAACGTCTT
ACCCGCTCTAAAGCTAAACTTCTCGCATATCAGTGGCTAGAGGACAGCTTGACAAAAGGA
GAGAAAGAATTTGAGGATCTGTATGTCTTGTCCCTGCAATCAGGAGGAGGAGGCTCCCTT
AGTCCTAAAGCTGATAATGGAAGTCATCCTAATAGCAGTGAAATTACACCAAAGAAAGGT
CGAAGTTCTGCTGAAGATGCCAAGAATGCAAGCCCAAGACACATGATTGACGCTAAAGAC
CTTGCTGTAGTTGATTCACGAGATACTAAAAGTGCCTCTTCACTCGCAACACGTTCTTCA
AGCCCAGAAGTGGCAAGTCCTGAGGTCATTGATTCTCATAATAAGCCTGTTGGAACATCA
GACTCATCTTCACTTTATAAGCCTCCGGATTTAAACCGAAATATCACTCAGATATTTGGG
AAGCTCATCAACATATATAGAGCACTGGGTGATGACCGGAGATCATTCAGCTATTATAAA
GCTATACCAGTTATTGAGAAATTGCCATTCAAAATTGAGAGTGCGAACCAGGTTAAGCAC
CTACCTGCTATTGGAAAGTCGATGCAAGACCATATTCAGGAGATAGTCACCACAGGGAAG
CTGTCTAAATTGGAACATTTTGAGAAGGATGAAAAGGTAAAAACAATTAGCTTATTTGGA
GAGGTTTGGGGTATTGGTCCAGCCACTGCTCTAAAACTTTATGAGAAAGGACACCGAACT
CTTGATGACCTTAGAAATGAGGATTCGCTGACTCATTCTCAAAGGTTGGGGTTGAAATAT
TTTGATGACATTCAATCCAGGATTCCACGGCATGAGGTTGAAGAGATGGAGCGTCTACTA
CAGAAAATTGGAGAGGAAATTTTGCCCAGTGTGATTGTTGTGTGTGGAGGATCATATAGA
CGTGGAAAGTCTTCTTGTGGTGATATGGACATTGTTATTACTCATGCTGATGGTAAAAGT
CATATAGGCTTTCTTCCTAAGTTTGTAAAACGTCTAAAAGACATGAAGTTTTTGAGAGAA
GATCTGGTCTTCAGTGTTCATAGCACAGAGGGTACAGATTCAGGAGTCGACACATATTTT
GGGCTTTGCACCTATCCTGGCCGAGAATTGCGACATCGCATTGACTTTAAGCCTCACTTC
TGTTGTTAG

Peptide Sequence

PEP ID

XP_016498808.1
PEP Infomation

PREDICTED: DNA polymerase beta-like isoform X4 [Nicotiana tabacum]
Sequence

MAPKSTSKKDKSPPSDPDGMFSGMVVFLIETGVQSRRLQIWKQKLVQMGAKIEERFSKNV
THVFAIDANSLLQKVDRERLTRSKAKLLAYQWLEDSLTKGEKEFEDLYVLSLQSGGGGSL
SPKADNGSHPNSSEITPKKGRSSAEDAKNASPRHMIDAKDLAVVDSRDTKSASSLATRSS
SPEVASPEVIDSHNKPVGTSDSSSLYKPPDLNRNITQIFGKLINIYRALGDDRRSFSYYK
AIPVIEKLPFKIESANQVKHLPAIGKSMQDHIQEIVTTGKLSKLEHFEKDEKVKTISLFG
EVWGIGPATALKLYEKGHRTLDDLRNEDSLTHSQRLGLKYFDDIQSRIPRHEVEEMERLL
QKIGEEILPSVIVVCGGSYRRGKSSCGDMDIVITHADGKSHIGFLPKFVKRLKDMKFLRE
DLVFSVHSTEGTDSGVDTYFGLCTYPGRELRHRIDFKPHFCC

Transcript Sequence

Gene sequence data has not been registered.